Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922779.1_cds_XP_016471545.1_63872
CDS Infomation

[gene=LOC107793664] [db_xref=GeneID:107793664] [protein=aspartyl protease family protein 1-like] [protein_id=XP_016471545.1] [location=join(10128..10444,11216..11351,12200..12435,12547..12771,12882..13017,13104..13177,13261..13360,13437..13497,13808..13879,13959..14218)] [gbkey=CDS]
Sequence

ATGGCTAATTCTTATACAAGTATTAATTTTTTCCTTGCCCCTATTATTTTCTTGGCGATT
CTGGGATTGCAGTTGCAGAGCAGCGATGGTTTTGGGACATTCGGGTTTGATATCCATCAC
CGGTATTCGGATCCGGTGAAGGGTATTTTGGACCTTCATGGATTGCCTGAGAAGGGCAGT
GTTGAGTATTATTCAGCTTGGACTCAGCGTGATCGCTTTATCAAGGGTCGCCGCCTTGCT
GAAGCTGATACAGCTAATTCCACTCCCCTCTCTTTTTCAGGAGGGAATGAAACTTTCCGC
CTCAGTTCTTTGGGATTTTTGCATTATGCAAATGTGACAGTGGGCACTCCTGGACTATCA
TTTCTAGTGGCACTTGACACTGGCAGTGACTTGTTTTGGCTACCCTGTGATTGCAGCAAT
TGTGTGCGTGCCCTCGAGACACGCTCTGGACGACGAATAAATCTCAATATTTACAGCCCT
AATACGTCGTCAACGGGTCAGATTGTTCCTTGCAACAGCACTCTGTGTGGACAAAGGAGA
CGATGCTTATCTTCACAAAATGCATGTGCTTATGGAGTTGCATATCTCTCCAATAACACC
TCATCATCAGGGGTACTGGTGGAAGACATCTTGCACTTAGAGACAGATAATGCTCAACAA
AAAAGTGTTGAGGCTCCAATTGCTCTGGGGTGTGGGATAAGACAAACTGGTGCATTTTTA
AGTGGCGCAGCTCCTAATGGTCTATTCGGACTTGGCTTGGAAAATATATCTGTTCCGAGC
ATGTTAGCAAGTAAAGGTCTTGCTGCAAATTCTTTCTCCATGTGCTTTGGGCCTGATGGT
ATTGGAAGAATAGTCTTTGGAGATAAAGGGAGTCCAGCCCAAGGAGAAACACCACTCAAT
CTTGATCAACTACACCCAACTTATAACATCAGCTTGACAGGAATAACAGTGGGAAACAAG
ATCACTGATGTTGATTTCACAGCCATTTTTGACTCTGGCACTTCATTCACATACTTGAAT
GACCCAGCTTACAAAGTCATTACAGAGAACTTTGATTCTCAAGCAAAACAGCCACGTATT
CAACCTGATGGCGAAATTCCTTTTGAATACTGCTACGGGCTAAGTGCAAATCAAACTACC
TTCGAAGTTCCTGATGTAAATTTGACAATGAAAGGCGGCAACCAATTATTTCTTTTTGAT
CCGATAATAATGCTCTCGCTCCAGGATCGTTCTGGCGCATATTGCTTAGCTGTTGTGAAA
AGTGGGGATGTCAACATCATTGGACAAAATTTTATGACAGGCTATCGCGTGGTTTTCGAT
CGGGAGAAGATGGTTTTGGGTTGGAAACCATCGGATTGTTATGATTCTAGAGGATCCAAC
GACAAATCGACAACTCTGCCAGTGAACAAGCGTAATTCTACTGAAGCGCCTTCGCCCTCC
AGTGTGGTGCCAGAGGCCACCAAGGGAAATGGAAGTGGAAATGAACCCGCTACTTCGTTT
CCATCTGTTCAATCATCTAAACCTGCAGCAAACCAAGCACCAGCACATTTCATTTGCCAA
CTTATGATGGCTCTGTTTTCCCTTTTTAGCTATTATTTGATCATTATTTCTTCATGA

Peptide Sequence

PEP ID

XP_016471545.1
PEP Infomation

PREDICTED: aspartyl protease family protein 1-like [Nicotiana tabacum]
Sequence

MANSYTSINFFLAPIIFLAILGLQLQSSDGFGTFGFDIHHRYSDPVKGILDLHGLPEKGS
VEYYSAWTQRDRFIKGRRLAEADTANSTPLSFSGGNETFRLSSLGFLHYANVTVGTPGLS
FLVALDTGSDLFWLPCDCSNCVRALETRSGRRINLNIYSPNTSSTGQIVPCNSTLCGQRR
RCLSSQNACAYGVAYLSNNTSSSGVLVEDILHLETDNAQQKSVEAPIALGCGIRQTGAFL
SGAAPNGLFGLGLENISVPSMLASKGLAANSFSMCFGPDGIGRIVFGDKGSPAQGETPLN
LDQLHPTYNISLTGITVGNKITDVDFTAIFDSGTSFTYLNDPAYKVITENFDSQAKQPRI
QPDGEIPFEYCYGLSANQTTFEVPDVNLTMKGGNQLFLFDPIIMLSLQDRSGAYCLAVVK
SGDVNIIGQNFMTGYRVVFDREKMVLGWKPSDCYDSRGSNDKSTTLPVNKRNSTEAPSPS
SVVPEATKGNGSGNEPATSFPSVQSSKPAANQAPAHFICQLMMALFSLFSYYLIIISS

Transcript Sequence

Gene sequence data has not been registered.